PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011091297.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family TCP
Protein Properties Length: 363aa    MW: 38211.2 Da    PI: 10.3139
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011091297.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP121.87.7e-38771763100
             TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.kaaksaa 95 
                      k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+qa+pai+++tgt++ +a ++  +++ +  + +ss++   + + +
  XP_011091297.1  77 MKRSSTKDRHTKVEGRGRRIRMPATCAARVFQLTRELGHKSDGETIRWLLEQAEPAIIAATGTGTVPAIAMsVNGTLKIPTTTSSAAgGGSDDPT 171
                     6999***********************************************************88888444322222222222222221111111 PP

             TCP  96 kskks 100
                     ++k++
  XP_011091297.1 172 NRKRK 176
                     22222 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036348.3E-3281174IPR005333Transcription factor, TCP
PROSITE profilePS5136927.49782136IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    Send to blast
MASPHTQAFP ADHQETGLNL PPPTDNKGST PNYPRRTPTA AQPLRMAPPT TISLKLEEPD  60
ADLGEDKPPG ILPHPQMKRS STKDRHTKVE GRGRRIRMPA TCAARVFQLT RELGHKSDGE  120
TIRWLLEQAE PAIIAATGTG TVPAIAMSVN GTLKIPTTTS SAAGGGSDDP TNRKRKRPSS  180
SEFIDVNTTG YPASNATNNF AITNANNSAI ISCNNASVSA PLMSVIPIPA MWAIPTVASN  240
SNSSTPTFLI IPPNQAAQVL TVQPAAALNL APVVNISAAA RPISAFVAAM QPSGGGVNVA  300
QPVAQINLQT FQSLSAGVSA EKPNLPSSSN SSGATKTQML RDVSWEIHEK KEFPFVPTRS  360
AKN
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00638PBMTransfer from Lj0g3v0004489Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011091297.10.0PREDICTED: transcription factor TCP9
SwissprotO646475e-61TCP9_ARATH; Transcription factor TCP9
TrEMBLF6I3602e-72F6I360_VITVI; Putative uncharacterized protein
STRINGVIT_15s0048g01150.t017e-72(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24824201
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45680.11e-59TCP family protein